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There may be a HV.1 sublineage with ORF1a:T4083M (C12513T; NSP8:T141M) first detected in California, USA.
As of 2023-08-30, Cov-Spectrum reports 29 good-quality (34 total) HV.1+ORF1a:4083M sequence…
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There may be a XBB.1.16.14 sublineage with ORF1a:T568I (C1968T; NSP2:T388I) first detected in California, USA.
As of 2023-08-18, Cov-Spectrum reports 23 good-quality (29 total) XBB.1.16.14+ORF1a:56…
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There may be a EG.6.1 sublineage with ORF1a:T2977K (C9195A; NSP4:T214K) and ORF1a:I4308T (T13188C; NSP10:I55T) first detected in USA.
This is a sibling lineage to the one described in https://githu…
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There may be a XBB.1.16.6 sublineage with ORF3a:H78Y (C25624T) and C29627T (putative ORF10:R24C) first detected in Wisconsin, USA.
As of 2023-08-27, Cov-Spectrum reports 28 good-quality (31 total) …
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There may be a XBB.1.16.21 sublineage with ORF1a:G963D (G3153A; NSP3:G145D) first detected in Utrecht, Netherlands.
As of 2023-08-25, Cov-Spectrum reports 23 good-quality (24 total) XBB.1.16.21+ORF…
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@afmagee
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There may be a EG.6.1 sublineage with ORF1a:A2584V (C8016T; NSP3:A1766V) and ORF1a:T2977K (C9195A; NSP4:T214K) first detected in Florida, USA.
As of 2023-07-01, Cov-Spectrum reports 24 good-quality…
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There may be a EG.6.1 sublineage with ORF1b:D1183G (A17015G; NSP13:D260G; ORF1ab:D5584G) and ORF1b:P218S (C14119T; NSP12:P226S; ORF1ab:P4619S) after T6547C first detected in Pennsylvania, USA.
Note…
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There may be a HV.1 sublineage with ORF1a:T4083M (C12513T; NSP8:T141M) first detected in Arizona, USA.
As of 2023-08-25, Cov-Spectrum reports 21 good-quality (22 total) HV.1+ORF1a:4083M sequences.
…
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There may be a EG.5.1.3 sublineage with ORF1a:V274L (G1085T; NSP2:V94L), C27612T, and ORF1a:E2268V (A7068T; NSP3:E1450V) first detected in Massachusetts, USA.
As of 2023-09-23, Cov-Spectrum reports…