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Hi!
First off, thanks to all developers and maintainers for this amazing package!
I am using HistomicsTK on Ubuntu 20.04.5 LTS.
During my work with it I noticed a potential bug in the file `s…
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We should accept single band images and just skip deconvolving them.
This would allow running the algorithm on arbitrary frames from multi-channel images.
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Right now, to create HistomicsTK docs, one has to manually run the appropriate `make` command in the `docs` folder. A cleaner way would be to cmake-ify this part of the project and generate this docum…
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Hi,
Thank you so much for histiomicstk.
I'd love to use your [colour deconvolution example](https://digitalslidearchive.github.io/HistomicsTK/examples/color_deconvolution.html)
and then recol…
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Show and allow editing selected metadata (from the Girder item `meta` record) in a panel in the HistomicsTK interface.
The current concept is that the metadata shown should be based on a schema tha…
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Traceback (most recent call last):
File "C:\Users\Administrator\Desktop\seg_pred\1.py", line 1, in
import histomicstk
File "C:\Users\Administrator\HistomicsTK\histomicstk\__init__.py", li…
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There are two issues that break gaussian_voting
https://github.com/DigitalSlideArchive/HistomicsTK/blob/d39f3053aa26fa7a811748c4176ad679b225bae7/histomicstk/segmentation/nuclear/gaussian_voting.p…
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After hours of frustration trying to get HistomicsTK installed and compiled properly on windows 11, a few additional steps to consider adding to the guide:
~~4- Install Visual Studio 15 2017 [Commu…
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I'm developing my own custom plugin partly based on HistomicsTK (to be used in DSA), where I have used a different backend ([FAST](https://github.com/smistad/FAST)) to run some algorithm that generate…