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Running this code:
curation_uri = sgs.FigURLCurationSelection.generate_curation_uri(
{
"sorting_id": (
sgs.MetricCurationSelection
& {"metric_curation_id": k…
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**Describe the bug**
Code in spikesorting quality metrics tries to create 1 floating point number out of a dictionary.
When running the line `sgss.QualityMetrics.populate([(sgss.MetricSelection & …
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https://github.com/flatironinstitute/kachery-cloud/blob/e5dd5fb57d4aa556f4a43523e0324bc472390c17/kachery_cloud/init.py#L28C1-L28C7
In some use cases, user code may change the environment variable `…
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### What happened?
Writing waveforms to an NWB file fails due to a variable naming error on line 1442 of `neuroconv/src/neuroconv/tools/spikeinterface/spikeinterface.py`. `nwbfile` is passed as an …
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Steps to:
+ share with people in other labs.
+ need parallel data folders
+ for other people to retrieve data.
edeno updated
10 months ago
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Steps to reproduce (Python 3.12.4):
1. `gh repo clone spikeinterface/spikeinterface && cd spikeinterface`
2. `uv venv && . .venv/bin/activate && uv pip install -e '.[dev]'`
3. `sphinx-build -b ht…
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**Describe the bug**
- Users having issues accessing some kachery files through the cloud.
- Digging into the request shows it arises from a file not found issue
- Current values for `kachery_clou…
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I am revamping my spikesorting workflow to individually sort shanks. I have been able to do all the prerequisite steps, code included below.
When attempting to run Kilosort4, the following tracebac…
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**Describe the bug**
In a fresh kernel, call:
`from spyglass.sharing import KacheryZone`
This results in a circular import (error) below.
_Note:_ Import another table first works fine and av…
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- [x] add figurl, plotly, credentials
- [ ] translate plots to plotly
- [ ] publish to figurl/kachery for individual figures
- [ ] create script that generates all figures
- [ ] dump links in …