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Dear Developer,
Thank you so much for Kaiju.
I performed spade assembly (for the virus) and performed kaiju on assembled contigs. For the reference database, I downloaded the viral database from …
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Hello
Had aa few struggles to make the script run without errors in our server clusters.
Still, after submitting a job with the script it fails to finish.
log.txt has the following:
DNA
Pai…
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Hi I have a problem when downloading the euk_nr database using the slurm scripts
I have installed a kaiju conda environment, and run the following codes
My HPC settings were
#SBATCH --ntasks-p…
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Hi all,
Sorry if this question is silly.
I have several fasta files from some kegg orthogoly of my interest which I extracted from prodigal and hmmsearch result. For example, the nifH, that is the…
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Issue to track the list of software to benchmark
- [Blast](https://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download)
- [Bonsai](https://github.com/dnbaker/bonsai)
-…
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We currently have a folder called `delete_me` in the modules repo.
This contains a wide range of files that have been deposited, mostly for specific modules.
It is NOT included in the README file, …
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Hello!
I'm trying to download progenomes database and see that:
Downloading taxdump.tar.gz
.listing [ …
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Hi! I have been using Kaiju for a while, and now I am interested in filtering fungal reads. For this, I used the Kaiju app in KBase and compared the results using two different databases: NCBI BLAST n…
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## Question
Hi!
I need to use Nestia on a Nest project with monorepo structure. Sadly, I get this error after enable monorepo mode.
```
Error: Error on nestia.core.TypedRoute.Get(): no transform…
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Any chance of adding in more inventory containers, especially now that you have implemented regex modifiers?
ie: Dino inventories, Extinction Bosses, Aberration Earthquakes
examples: DinoDropInv…