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We should enrich the task model with some new (optional) attributes:
1. `type: Optional[str] = None`. Examples of typical values: `Conversion`, `Segmentation`, `Registration`, `Measurement`
* `t…
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There is a surprisingly large community of people using Dask for bio-medical imaging. This includes applications like fMRI brain scans, and very high resolution microscopy (3d movies at micro resoluti…
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in the script `[Run_stitching_and_fusion.groovy](https://github.com/BIOP/lightsheet-brain-workflows/blob/main/Run_stitching_and_fusion.groovy)` add checkboxes for each element
lacan updated
2 months ago
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See e.g. https://deploy-preview-36--ome-ngff-validator.netlify.app/?source=https://radosgw.public.os.wwu.de/n4bi-goe/Platynereis-H2B-TL.ome.zarr/setup0/timepoint0
cc: @will-moore @constantinpape
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I tried the edge detection on my own atlas files:
![image](https://user-images.githubusercontent.com/67700096/115212426-ca3d0280-a100-11eb-88a0-f6b95e842423.png)
but the result is broken:
![image](…
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Hello!
when I try to start Imswitch, I get this error and I'm sure thatr Jupyter notebook is installed. Any suggestions?
![jupyter-notebook](https://github.com/openUC2/ImSwitchInstaller/assets/8…
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Hi all, BDP2 brings an outstanding possibility to deskew Zeiss lattice lightsheet images in real time. I recorded a super simple macro that works (smi_deskew, it is .ijm).
1. Then I place it in the …
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@yarikoptic @jwodder -- wanted to start a GitHub Issue to get consolidation of `linc-cli` https://github.com/lincbrain/linc-cli back to `dandi-cli` -- working with @satra @kabilar here to merge LINC w…
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Hi Zarr Community! 👋🏻
We're planning to have a page on our website to showcase the groups using Zarr. These can be organisations, companies, research groups and labs, academic institutions and univ…
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## Description
One of my major goals for this year (this statement will come back to bite me I'm sure!) is to add registration capabilities to scikit-image. Registration should at a minimum work in…