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To move forward on the recurring issues of grouping OBO ontologies into some useful macroscopic categories/domains, there were a few proposals:
- @zhengj2007 [Proposal](https://docs.google.com/spre…
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**Submitting author:** @vipinagrawal25 (Vipin Agrawal)
**Repository:** https://github.com/vipinagrawal25/MeMC
**Branch with paper.md** (empty if default branch):
**Version:** v1.1
**Editor:** @fboehm…
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I would like to know if the pylipid package runs for interactions of lipids with a compound, not a protein.
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This is a followup to the discussion that started in #3347. I'm moving it here so it won't get lost in the discussion for a merged PR.
When running the amber20-stmv benchmark parallelized across f…
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We need to figure out a good title for the article. Current title is only the working title. Suggestions are welcomed here.
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In addition to play with the source code, I also asked the Samtools community for help:
https://github.com/samtools/samtools/issues/1406
https://github.com/samtools/samtools/issues/1407
https://g…
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Hi all,
I've looked at the analysis of dihedral distributions from lipid structures in PDB and would like to comment on that. My point is that many of the lipid conformations in the PDB models are …
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The `rtx_kg1_neo4j_to_kg_json.py` script assigns the CURIE prefix `RTXKG1:` to `relation` properties for edges. Of course, most of the edge types in KG1 actually have source prefixes. We should probab…
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This issue has been created to discuss the relationships of vitamins and their vitamers in CDNO and CHEBI.
**1.** We have ask CHEBI team, specially @amalik01 for clarification about the relationshi…
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Dear Wanling,
I am trying to analyze my coarse grained simulations using PyLipID tool. I get below logomaker error. Please can I know what may be going wrong. I have also included the command I am …