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Hi there. I'm currently discussing with our cluster admins if we can integrate the Galaxy data cache cvmfs.
They had a few questions:
1. is there a (defined) curation process of the data and m…
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Hello @gjeunen !
I am trying to use the `primer_efficiency` function but I'm running into an issue. I am using version 0.1.8 in a Linux cluster using gitBash on my PC.
I have downloaded a mitoge…
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mitoz3.4 annotations draw circle diagrams all have a gap, but in other annotation platforms are circular
## Problem description
# Log messages from MitoZ (stdout and stderr)
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I used the following command on test data this is the error.
python /home/eniac/MitoHiFi/src/mitohifi.py -r /media/eniac/WD1/HiFi_Dikaryon_data/ilDeiPorc1.reads.100.fa -f /home/eniac/MitoHiFi/test…
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Hello,
I am trying to assemble plant mitochondrial genome.
First I assembly choroplast genome and I get Contigs*, Merged_contigs* and Option_* files as a result. So it looks OK.
But when I try to a…
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### Project title: Comparative analysis of camel mitochondrial genomes ###
#### The aims of this project are to: ####
- annotate the mitochondrial genome of Arabian camel
- the mitochondr…
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hi everyone, i'm trying to evaluate the mithocondrial DNA of my sample (fusarium sp.);
i performed the assembly with flye tool on galaxy.eu and use the fastg file produced by the tool.
i always get …
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Is it possible to run Novoplasty in parallel threads? As it's taking a lot of time during the Hash table generation, is there any other way to speed up this process. Between, I am using novoplasty for…
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This issue comes from the https://github.com/marcelauliano/MitoHiFi/issues/26#issuecomment-1282343446 . This is a proposal for enhancement.
I executed the `mitohifi.py -r ...` with this repository…
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Hello and thank you very much for developing this software :)
When assembling mitogenomes using NOVOPlasty, for 2 out of 5 samples the reads have been subsampled, even though I havent set any "Max me…