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Specifically these ones.
https://cancer.sanger.ac.uk/signatures/experimental/
Thank you
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Hi, Im having some issues with the above command. Hope you can help. Any ideas you had would be very useful.
When running the following command
> denovo_signatures NMF::nmf - 20/20 fit(s) threw …
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Hello Zhi,
I am trying to run the HiLDA tutorial provided with 3 flanking bases instead of 5 bases on your simulated data and esophageal data. This is the code that I ran (for the simulated data, I…
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Hi there! When I ran the bayesNMF code provided in your directory using a simulated cancer mutational catalog to en, I have encountered the following problem after the 30X optimization has finnished:
…
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As a TL I would to check the report consistency, identify and flag inconsistencies so that we can improve confidence in the report.
**Acceptance Criteria**
- [ ] Identify report rows where the m…
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The patient view of a patient with mutational signature data is currently broken:
```
{"type":"ErrorBoundary","log":"TypeError: /\\(([^)]+)\\)/.exec(...) is null","url":"https://www.cbioportal.org/p…
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- [x] Lot of whitespace initially between chart and interactable component. Maybe we can have some expand-like animation of the bottom chart, so the table controls are more visible on page load?
inodb updated
2 months ago
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Hello,
Thanks for a great tool! I have been using it to randomize the position of mutations in samples while controlling for mutational signatures. However, I have noticed that I am not getting the…
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Dear developers,
Thanks for this tool!
I've successfully run cosmic_fit for both SBS96 and DINUC context types, but am getting the following error when attempting to run it for the "ID" context ty…