-
New term request Lymph node biopsy: necrotizing granuloma (samant_101230221928): Granulomatosis
-
[BTB001_S140.errlog.txt](https://github.com/user-attachments/files/15951736/BTB001_S140.errlog.txt)
Please help resolve this error. I have attached one f the errlog.txt files
-
New term request Wound culture or tissue sample: Acid-fast bacilli present (seidel_190313151521): AFB stain positive UMLS: 0486278
-
Hello, very helpful package!
Just wanted to bring attention to a potential bug that I noticed with the recent release. In the function is.genome.available() if the argument skip_bacteria = FALSE…
-
WHO has issued a update of the “Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance”. Will the catalogue file be updated accordingly? Thank you so m…
-
Thanks for all of your work on TBProfiler. Running;
```
tb-profiler profile --bam rpoB.bam --external_db tbdb/tbdb
```
This worked on v5, but now on v6.2.1 (installed from conda) getting the bel…
-
There are 400 SRC proteins in the IEDB `source` table that are not in ONTIE. Of these, 189 are inactive or related, so they don't appear anywhere in the protein tree. Of the remaining 211, 73 of them …
-
It’s sort of difficult to keep pace with all your different releases😀. So, which one should I use? Kraken, KrakenUniq or centrifuge??? I just have started centrifuge; should I move to KrakenUniq?
T…
-
-
Do you happen to have taxon identifiers for the training data in this file?
https://genome.cshlp.org/content/suppl/2018/03/22/gr.228429.117.DC1/Supplemental_Table_S1.xlsx
It's currently difficu…