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listed/coded in https://github.com/TheChymera/neuralynx_nwb/blob/master/neuralynx_nwb/compatibility.py#L14
should get represented as linkml model, and then validated upon assigning/loading all the …
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- kerchunk
- @yarikoptic might want to look either support for niftis could be added/needed
- https://github.com/neuroscales/nifti-zarr/pull/1/files -- attempt to store NIfTIs in zarr
- sidecar…
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Goal: A slightly technical perspective piece describing the problem of representing arrays in schema and how array support within LinkML solves the problem
A rough first outline:
1. Background
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getting an error when spikesorting \projects\ec109\maria\novel-env-nwb\actions\148-300921-2
Postprocessing
Extracting waveforms
Computing QC metrics
Exporting to phy
ERROR: unable to proce…
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Currently, the NWB output by Suite2p has dummy information, which could be filled in with actual information from incoming data if it is also NWB format. The pieces that need to be addressed that I …
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### What happened?
I am trying to read information from the units table in this file: `s3://aind-open-data/ecephys_625098_2022-08-15_08-51-36_nwb_2023-05-16_16-28-23/ecephys_625098_2022-08-15_08-51…
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- [x] Move schema language to new repo hdmf-dev/schema-language
- [ ] #501
- [ ] Move schema validator code to hdmf-dev/hdmf
- [ ] Restructure /core and /docs/format to be similar to an NWB extensi…
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From the description for ElectricalSeries:
https://github.com/NeurodataWithoutBorders/nwb-schema/blob/308c5d80d842f2e45cf25042cb12887ec8c7cbab/core/nwb.ecephys.yaml#L4-L7
It says the data can be…
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### What would you like to see added to HDMF-ZARR?
It would be nice to have a test NWB (or HDMF) Zarr dataset stored somewhere like our Google Drive, that users can download to explore its structure …