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Some RNA extraction terms were added to OBI. Details on the tracker item
https://sourceforge.net/tracker/?func=detail&aid=2915152&group\_id=177891&atid=886178
All the definitions and restrictions ar…
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Hi Alevin-fry developers,
I am using simpleaf (simpleaf 0.14.1) to quantify the protein ADT data. somehow, only 109 cells in the final quantification. The corresponding RNA data gives me 10K cells.…
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For new term requests, please provide the following information:
## Preferred term label
PhenoCycler
## Synonyms
CODEX, PhenoCycler-Fusion
## Textual definition
A spatial discovery s…
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Related to https://github.com/biothings/BioThings_Explorer_TRAPI/issues/532#issuecomment-1358768948
MyChem `chembl.drug_mechanisms` data, in subject-association-object format
* We want 1 associa…
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Is defined:
Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.
but has synonyms
5'-nucleotide phosphodie…
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This is a request to restore the --input-pcr-primers functionality in CLI v3 as we do use this in our pipelines.
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update drugbank knowledge source
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We have generated some sequencing data from short (50 bp) oligonucleotides with strand-specific modifications and I was wondering if there is a way to use Remora to identify signatures of these modifi…
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Hello,
I want to detect RNA modifications (R9.4.1_70bps) for a single sample. From the data preparation training documentation the control sample and treatment datasets are merged. Does model train…
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Hello,
I have been unable to locate the high-resolution .TIF images for the samples mentioned in your paper.
The images provided on the following website (https://zenodo.org/record/4751624#.ZFs1JC…