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Hello,
I was wondering if I can use AutoDock-Vina for docking between proteins and peptides.If not, do you have other suggestions?
Best Regards
Soodabeh
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Hi,
We are performing glycopeptide identification and quantification across many samples. The data in the "assigned modifications" column of the "combined_modified_peptide.tsv" file gives only the …
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Hello,
My understanding is that the `coord` column contains the coordinates of the _splicing event_ (e.g. the coordinates may be that of a skipped exon) and not the genomic coordinates of the seque…
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https://www.bio-cd.com/post/WstMVAZB5/
Chengdu Shengnuo Biotechnology Co., Ltd. has Chengdu "Chengdu peptide drug engineering technology research center", which is mainly engaged in the research of…
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Continuing with our GO_CHEBI cross-products, I have the following peptides... do these come under ChEBI's domain?
1. enniatin
A class of organic fungal depsipeptides.
2. beta-amyloid
A 36–43aa pepti…
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Thanks again for this awesome work.
I am wondering if there is something wrong in principle in trying to optimize large molecules like peptides using Delete.
I would like to start with the protein…
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Hello, nice tool, thank you for publishing it.
It would be nice to be able to input DIA-NN's report.tsv, as I am not 100% sure on how to convert that to the generic csv.
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```
The first column of the pairs output file just has the protein accession, this
should also contain the peptide sequence I think
```
Original issue reported on code.google.com by `andrewro...@goo…
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I wonder if PanPep can be used to predict the probability of binding of unknown BCR CDR3 to antigenic peptides if reference data sets for BCR-peptide binding are now available. Looking forward to your…
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Hi
whether the exported results from DIA_NN contain information about peptide coverage?
if not, how can I use the output files to calculate the peptide coverage? at the same time, if there are any …