-
```
At PSI 2013 some preliminary work was done on supporting crosslinking in
mzIdentML. A sketch of one possible solution is as follows:
RVDKSGLHCPLLPDDR
NGVTL…
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@jadianes I cannot state enough that how nice it is to see the new shiny cluster summary page, really nice work there.
Below are some comments, these are only some ideas:
- May be make the "Primary …
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This is a follow-up of issue #111, thanks to all the information provided, I am able to find a possible bug and its reason.
I did experiment with weights "pretrained_excl_yeast.ckpt", deepnovo ori…
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Here, I want you to post pieces of (open-source) software that could be integrated into Galaxy. To make a start:
- [MSeasy R Package](https://github.com/cran/MSeasy) - GC-MS preprocessing in R, int…
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Hi, I have a question about the decoy generation. The method in your paper is "By default, this is done by replacing the fragment ion m/z values of the target precursor assuming the amino acids adjace…
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After obtaining the UniSpec source code and Python scripts from this webpage and the generated datasets and analysis results from Zenodo (https://zenodo.org/records/10052268), I found that when runnin…
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From https://sentry.galaxyproject.org/share/issue/da466f63ec5541e58db2ce827ada3918/.
I can't see any use of `$protein` in the configfile, but this is not easy to read.
These were the selection optio…
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Hi,
Would it be possible to add a converter for Protein Prospector output?
Cheers!
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```
Eric posted this message to the list. You need to read the attached pdf
containing images for it to make sense
***************************
2) Our next challenge was how to encode the TPP probab…
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Hi,
All the identified peptides with their values are mentioned in result table - identification/peak areas.
Could you tell about the reasoning behind their order ?
It might help immensely to h…