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Follow on from
https://github.com/pombase/website/issues/1916
The 'allele comment' is a fairly recent thing., Historically we put "allele comments' in the genotype comments field. I suspect 99.9%…
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Instead of implementing ES logic externally we prefer to use GROMACS to do this. This should reduce bugginess, instability and complexity.
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### Bacterial Quorum Sensing and Microbial Community Interactions
_DOI: [10.1128/mBio.02331-17](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5964356/pdf/mBio.02331-17.pdf)_
- Introduction:
`…
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Hi
I was wondering if one can use groamcs-ramd to get binding events instead of unbinding. Is it possible to change the parameters in which the ligand approaches the binding site instead of getti…
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As will be discussed in #66 there have been two new structures deposited:
Nov 2021: _Pseudomonas aeruginosa_ MurD, SSGCID code [PsaeA.17938.a](https://apps.sbri.org/SSGCIDTargetStatus/Target/PsaeA.…
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We know the cleaveage sites into the protein, as explained here.
> SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor
Published on Cell, …
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HelloProfessor,
What I am trying to do is separate a small DNA fragment from the binding pocket of a protein and plot the free energy path. Should I use BFEE for this purpose, considering a DNA mole…
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While curating Wang et al. 2020 that indicates that Pdilt is involved in the same process as Lypd4 to mature Adam3, a sperm cell surface protein involved in the process of fertilization:
- Wang D, …
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For documentation only (we possibly had related references in a vignette somewhere):
[amsrpm: Robust Point Matching for Retention Time Aligment of LC/MS Data with R](http://www.jstatsoft.org/v18/i04)…
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Before implementing a specific GPU Kernel we should run a performance test in order to (a) get an impression what the state of the art is, and (b) make sure we're not running into problems by picking …