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On the newest version of the docker image on Biocontainers (quay.io/biocontainers/searchgui:4.0.33--h779adbc_0 found at https://biocontainers.pro/tools/searchgui), MS Amanda and Myrimatch are not exec…
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Hi,
There is an error when I converted a timsTOF Pro diaPASEF file (TDF) to mzXML using MSConvert GUI (Version: 3.0.19166-cc86d1f56). TDF schema version 3.1 not supported. The screenshot is attac…
Mnago updated
3 years ago
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Dear Vdemichev,
I am using Waters Synapt G2 to do IMS proteomics experiment.
I have converted the raw files using proteowizard and I combined the ion mobility scans.
I started by generating the s…
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Hello,
When I try to convert raw file with profile spectra to mzML format with Peak Picking option selected, I got the following error message:
Processing...
Writing
Failed - System.Exception…
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Hello,
I've got an issue getting IDBac to run in R. I'm using R 4.4.0 right now. I've successfully installed IDBac -- no errors came up during the installation process. Running it gives the following…
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Scheduled data collected on the Sciex 7500 is formatted using a one-sided RT range tolerance value.
msconvert is currently treating this one-sided RT range tolerance value as though it were a compl…
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Dear contributors,
I encountered an error while using XCMS to process a mzML file with combined ion-mobility scans. This data file was converted using "combine ion mobility scans" function in MScon…
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# Abstract
Data Independent Acquisition (DIA) creates a “permanent record of everything” that is ideal for reanalysis, arguably the primary goal of public data repositories.
Within ProteomeXchange…
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I'm was planning to try and contribute a method to get the value of "compensationVoltage" from the scan header (relevant for the new thermo bolt-on FAIMS device), but I'm realizing after reading your …
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Hi Casanovo
This is the first time i'm attempting to use casanovo, i have tried to follow your guide at : https://casanovo.readthedocs.io/en/latest/getting_started.html
I'm getting this error (s…