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compomics
/
searchgui
Highly adaptable common interface for proteomics search and de novo engines
http://compomics.github.io/projects/searchgui.html
38
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16
forks
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Error: File exceeds memory mapped reader max buffer size.
#371
esraaelmligy
closed
2 months ago
9
Adding spectrum file(s) does not recognize .d as valid
#370
tomthun
closed
3 months ago
6
support for sage variable and fixed modifications by mass
#369
kostrouc
closed
4 months ago
7
Java VM support
#368
mknierman
closed
4 months ago
2
SearchGUI + X!Tandem results in some peptides not ending in K or R
#367
prao123
closed
7 months ago
3
Comet -- Error: No index found for enzyme Trypsin.
#366
jeffsocal
opened
8 months ago
6
Trypsin digestion, sequence not ends with "KR" and at the end of a protein sequence
#365
ATPs
closed
8 months ago
2
File Extension Mismatch in ThermoRawFileParser Conversion Using SearchGUI
#364
jacobfh1
opened
8 months ago
1
Search failures with searchcli docker
#363
fiuzatayna
opened
9 months ago
2
Getting a java.lang.NullPointerException when running searchGUI in a container
#362
steve-lefever
closed
9 months ago
8
How to configure fractions in PeptideShaker
#361
kazbek966
opened
9 months ago
1
I cannot add my database into SearchGUI
#360
hooria123333
opened
9 months ago
1
Issues with Andromeda vs other search engines
#359
photocyte
closed
10 months ago
2
SearchGUI does not download
#358
mi3-14
closed
10 months ago
2
Search hangs on "Converting Spectrum file xxxxx.mgf to peak list" even using most up to date Java
#357
nCeon
closed
11 months ago
0
MS file exceeds memory mapped reader max buffer size.
#356
milnus
closed
2 months ago
2
Failed to start getMemoryParameter()
#355
JesusCastano01
closed
11 months ago
3
MSGFPlus.jar is zero length in SearchGUI-4.2.16-mac_and_linux.tar.gz
#354
photocyte
closed
1 year ago
4
Getting 'Failed to write to the log report file' when running Search CLI
#353
Michal-Babins
closed
9 months ago
6
parameters file not generated
#352
esraaelmligy
closed
1 year ago
1
searchgui for pepsin data
#351
biocc
closed
1 year ago
1
Different results got from MS Amanda2.0 standalone and SearchGUI.
#350
JuneCoco
closed
1 year ago
4
Could SearchGUI write somewhere else than in SearchGUI-4.2.8/resources/(conf | temp) ?
#349
max-l
opened
1 year ago
14
An issue using MSAmanda2.0 within the SearchGUI.
#348
JuneCoco
closed
1 year ago
2
Hello, I am graduate student using peptide shaker.
#347
kyungsikshi
closed
1 year ago
1
tide: Wrote peptides to temp files takes extremely long time
#346
KKKKK-tech
closed
1 year ago
7
omssa: not enough peaks in spectra
#345
danyunghsu
closed
1 year ago
2
error with mzML file
#344
danyunghsu
closed
1 year ago
4
sage is really slow and peptide shaker won't open the output
#343
justmpm
closed
1 year ago
8
Hello I am a user using searching gui and peptide shaker.
#342
kyungsikshi
closed
1 year ago
3
Does not work with me
#341
kailaw138
closed
1 year ago
2
SearchGUI java error at start
#340
LaszloGyoery
closed
1 year ago
4
Search cancelled
#339
mdondrup
closed
1 year ago
11
Download site down, add mirror
#338
JohnsonDylan
closed
1 year ago
2
Fasta Input With Wildcards Peptide Shaker
#337
kostrouc
closed
1 year ago
3
Myrimatch was unable to complete the search
#336
KKKKK-tech
closed
1 year ago
2
Question about FDR
#335
KKKKK-tech
closed
1 year ago
6
Integration with Sage
#334
lazear
closed
1 year ago
53
Multiple enzyme digestion
#333
carolinelennartsson
closed
1 year ago
13
SearchCLI: MS-GF+ options
#332
tivdnbos
closed
1 year ago
5
Andromeda for linux
#331
carolinelennartsson
closed
1 year ago
2
OMSSA issues
#330
carolinelennartsson
closed
1 year ago
1
Installation issue of searchGui with Java
#329
EmilieCarneiro
closed
1 year ago
2
Stuck on "Importing spectrum file"
#328
iquasere
closed
1 year ago
5
Can't run searchGUI on Linux
#327
zys7777
closed
1 year ago
4
ERRor!!!
#326
pelintnp
closed
1 year ago
4
About Non standard fasta issue
#325
kyungsikshi
closed
1 year ago
11
Partial results only
#324
laurenfields
closed
1 year ago
4
Json file format
#323
profbiot
closed
1 year ago
2
Support for timsTOF data?
#322
hcadre
opened
2 years ago
1
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