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This was fun, I am looking forward to some more lessons, perhaps involving other biojs.io modules!
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**Description**
GPL-673 | As leads for PAMs cotrack (Ian W, Jason O & Christopher J) we would like to identify the COG-UK samples in the 96well CP plate from the MLWH to track samples that have been …
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At the time of writing this is waiting on a file of all submissions from Quan. See following email thread:
> Hi Richard,
>
> Just to let you know, Quan will generate the full list but it will ta…
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I am using samtools and htslib latest version 1.9
- OS - Linux Ubuntu 18.04.03 LTS
- compiler (run `gcc --version` or `clang --version`)
gcc (Ubuntu 7.4.0-1ubuntu1~18.04.1) 7.4.0
We are using …
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See wiki document for biosample repository. Needs to be updated with more description and get comments back from PIs so we have path forward.
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**User story**
As a user of the scRNA Core pipeline, I would like the LIMS to help me prevent 'donor clash' when I am pooling together tubes for sequencing. This means that the pool should not contai…
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Hi
It would be cool if there was a wiki section that would include the entire approach (including the wetlab part) of training new models. e.g. what would be the best experimental design to train m…
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Hi,
I must say you did great work with BG7. I am trying to use BG7 pipeline for annotation of our Lactobacillus gasseri strain (454 sequencing + Sanger gap closures – in large contigs). Firstly I hav…
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This entry was created as part of issue #866 by @erasche on 2016-02-11. I split the issue to address separately.
#
- [ ] Zoom level is too restrictive:
- [ ] My users want to zoom further, it's ha…
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```
If a read aligns partially to the end of a fragment, it won't pass the guard
that requires 90% of its length to be mapped for it to be counted. These reads
should get to count the part that exte…