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### Is your feature related to a problem?
In one of my samples, wf-single-cell fails to correctly find the cutoff in the knee plot and returns an excessive large number of cells. Consequently, when l…
ddiez updated
4 weeks ago
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Hi!
Really cool package that's easy to use. I've already compared it to some prior selections using geneBasis and think I'd like to switch over. One of the things I'm I'd like to make sure I unders…
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Hello,
I have downloaded the scRNA-seq data from the articles for analysis. Some articles only provided TPM data (The TPM data obtained by RSEM is performed on smart-seq2 data), while others only p…
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Hi, we have sequenced 5 samples' scRNA-seq in your company and when I got the data, I found that there are multiple directories under each sample and for each sub-directory, there are also two pairs o…
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### Problem/New Plotter
When joining two main canvases in a row or column, the specified size of the second canvas appears to be ignored along one dimension.
For example, if we have
```
data1 = …
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Hi Dr. Zhang,
I read your Polarbear paper and planned to run the model on some multiomics data for the Human Brain to see how well your model performs on human brain tissue. Do you have a pretraine…
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This issue will be used to keep track of existing methods that transfer labels from a reference dataset to a target SRT dataset.
1. [Spatial-ID](https://www.nature.com/articles/s41467-022-35288-0#…
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It seems that would be a powerful tool for the scRNA-seq data.
One of main concern is that acquiring reliable variants set for scRNA seq is challenge due to the high false positive and the limited se…
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Hello,
Recently, I'm reading the paper, **Single cell transcriptomics reveals spatial and temporal dynamics
of gene expression in the developing mouse spinal cord**. I have some naive problems.
1.…
hahia updated
4 years ago
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Hi,
many thanks for developing and maintaining this very useful tool!
I have been successfully using fastTopics for scRNA seq analysis of B and T cell differentiation and it added significantly …