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James has implemented a version of this.
It does a least squares fit to time series data (infected hospitalized?) to determine Re
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This is an umbrella issue to start refactoring the code into something more reusable, sustainable and testable. The idea would be to have the code for Model 1 split in different files depending on its…
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## data / parameter range sourcing
- [x] population
- [x] infection rate
- [x] number of patients requiring ICU
- [x] average duration of ICU stay
- [x] number of ICU beds
- [x] number of ventil…
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This has happened after migrating from 0.14 to 1.0.x on code that ran without issues on the older version. This is a basic SEIR model on a network (no quarantine/tracing/social distancing), after inst…
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## Technical questions
* Python version: 3.10.6
* Operating System: windows10 64 bit
### Description
Time dependant functions is not working for stratified parameters, because of bug in …
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Although I still plan to switch to a more sophisticated model in the future, for the first web-version we need some fine-tuning. This is more for the look and feel, since intrinsically this work real…
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### Summary
There's no a priori reason to assume that transition of a person from the Susceptible to Infectious states corresponds with immediate development of symptoms requiring hospitalizati…
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For most configs we have R helper scripts that have to build some element of the config, like seeding. Would be good to not have to run these separately, but could be called from config to run, before…
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Thank you for helping us to have a check on the following two issues we currently encounter in our project about stochastic epidemic compartment models:
1. H1N1-Brownian Motion Model: this model is…