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Hi Dictys team,
Congrats on this package, it looks really promising! I saw it in your poster at the Single Cell Biology in Hinxton.
I have a 10X multiome dataset for which I would like to model …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/tagtag/TDbasedUFE
Confirm the following by editin…
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https://mp.weixin.qq.com/s/KyqJfWW7MDoFHT70mXLpeA
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https://mp.weixin.qq.com/s/-VAb0bm3fqTcPYJUAkSzAA
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/tagtag/TDbasedUFEadv
Confirm the following by edi…
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I have a high-resolution scATAC dataset for one tissue, but I would like to combine this data with bulk ATAC-seq from different tissues/embryonic stages for topic modeling as a means of identifying pl…
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https://mp.weixin.qq.com/s/u2I12GvR3YJJ5h6EJktXcQ
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https://www.bdbiosciences.com/en-ch/products/instruments/single-cell-multiomics-systems/rhapsody?gclid=CjwKCAjwwdWVBhA4EiwAjcYJEAGJEkdvjMXr3ZewVHzKo1QIM-CQ6zzL0P6BvJ4DxzbYfw8lpAuLBBoCKU0QAvD_BwE
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**Submitting author:** @alawryaguila (Ana Lawry Aguila)
**Repository:** https://github.com/alawryaguila/multi-view-AE
**Branch with paper.md** (empty if default branch): joss
**Version:** v1.0.0
**Edi…
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Hi,
I have a 10x multiomics (RNA+ATAC) experiment, and am trying to use `chromap` for the ATAC portion and associate it with RNA analyzed by `alevin-fry`. My ATAC files are in the format with `R1`, `…