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**Input:** Streptococcus pyogenes reads (a negative control in our re-validation dataset).
**Error:**
```
Error executing process > 'results'
Caused by:
Process `results` terminated with a…
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After what appeared to be a normal install, I executed the test run as listed on your main GitHub page, and it's **entire STDOUT is copy / pasted below**. As you can see, everything but the expected f…
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For *Streptococcus pyogenes*, we are interested in the M1UK lineage (first described here: ).
Add a functionality where the 27 lineage-specific SNPs are searched for all Spyo.
This should be imp…
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Looking at the Viral Zone description of this term, https://viralzone.expasy.org/3965, this term describes a interaction between 3 organisms. We'd like to clarify the definition.
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Hi all,
I am running as such:
phyloFlash.pl -read1 S_1.fastq.gz -read2 /S_2.fastq.gz -readlength 100 -lib S_def_6 -dbhome phyloflash/db/138.1 -taxlevel 6 -html -treemap -zip -log -poscov
I ha…
ghost updated
3 years ago
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Hi,
First of all thank you very much for such amazing tool!
I have installed SraX using conda and plots are not generated.
After inspecting log files I have noticed that R packages are not instal…
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https://mp.weixin.qq.com/s/Aw4IkX_D_HvkVb2K6OOzfA
ixxmu updated
2 years ago
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Hi,
I am running PhISpy 4.2.6 on a set of contigs, one contig per PhiSpy run, and for some of them it is not able to finish the analysis. After identifying potential prophages, RAM usage scalates …
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https://mp.weixin.qq.com/s/zYebCGk36Nwi80J3RKPtbw
ixxmu updated
2 years ago
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These are referenced by ClinEpi terms and will be imported so those terms can have logical definitions.
(If a parent is not mentioned, it will be computed by Ontofox)
ID | label | note/alt. labe…