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Dear author, thank you for your great job~
I would like to know the detailed version of pytorch and python in your model environment. Since when I use the model you release, the PSNR & SSIM result…
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Greetings team,
Can you provide guidance on addressing the issue of Foldseek returning unexpectedly high E-values (greater than 0.05) when querying small peptide structures (length between 5-20 AA)…
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The current compare_image function in the tests results in unbounded values being returned. Every time I create a new test I have to look at the image manually to check if they are the same and then a…
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Good morning, I finally managed to install everything and the tool run to the end. Unfortunately, I'm having some issues with the LTRstruct pipeline:
I run repeat Modeler on three different genomes a…
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At line 120 of genra/rax/skl/reg.py the code `neigh_dist_n = neigh_dist / neigh_dist.max()` will not work if neigh_dist.max() = 0. I produced the error by running code that asks GenraPredValueHybrid …
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Hi CHESS,
First of all, thanks so much for letting the users updated about this beautiful software! Like many, I was also recently trying to use CHESS to analyze Hi-C data that our lab has generate…
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SSIM would be easy to implement in python [1].
The gradient can be calculated [2] so we should be able to use this as a metric?
[1] http://en.wikipedia.org/wiki/Structural_similarity
[2] Zhou Wang a…
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**Short Description**
Single-Image Super-Resolution describes the domain of enhancing image resolution for single images (as opposed to groups of images of a scene, for example). Solutions in this do…
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Hi Foldseek developers,
I have two databases called db1 and db2. I want to find the structural similarity between some pairs of proteins like ("pr1", "pr2") where pr1 is from db1 and pr2 is from …
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Dear Jonas Kulhanek,
I am currently working on replicating the results presented in your Tetra-NeRF paper, specifically those related to the **Blender dataset's ship object**. In the original paper…