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Not urgent, nor really important, just an idea. I may have brought this up in the past, but can't seem to find any traces of it easily (so may have *not* brought it up :man_shrugging:).
In princip…
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Recently encountered this error on tractography quality check:
Index exceeds the number of array elements (2).
Error in wma_classificationStrucGrouping>@(x)x(1:length(removalVec{iRemoveLabels})) (…
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Hiya,
Thanks for this great tool.
Installation no longer works because this version is not compatible with newer versions of eigen. Errors are reported along the lines of:
```
failed with o…
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I have recently been working with .tck fiber tractography files generated by MRtrix3, and all processing steps were conducted within the DWI space. However, upon attempting to open these .tck files in…
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Given a DTI dataset scanned with PatientPosition as FFDR (Face First Decubitus Right) rather than the common HFS (Head First Supine):
Need to ensure that DWIConvert, as well as tensor estimation an…
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Hi @bids-standard/maintainers & everyone,
I hope you're doing fine.
This issue is meant to track/gauge interest and progress for a specification extension focusing on `diffusion tractometry` as …
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Hi whitematteranalysis team,
I am having RAM issues running the wm_apply_ORG_atlas_to_subject.sh script with dMRI data.
I get "Unable to locate 25,7 Gib for an array with shape (2500, 1379526) a…
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Hello,
Although UKFTractography completed without error for most of my cases, I have 3 cases that threw the following error. Any insight is appreciated - thank you!
(pnlpipe3) [root@4d78e987681…
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Hi! There are FA, trace etc for each tensor in diffusion measurements. However in many articles with two-tensor UKF tractography application it is not specified which of two tensor's data had been use…
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With low resolution/direction dMRI data, you have limited options for tractography and will suffer from losing crossing fibers when using DTI. We could show this in a tutorial. You could also use a te…