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The `format` attribute is meant to support custom data formats, like CSV, DSV, TSV, etc.
Fixing this will require reworking the parser to support contextual parsing of the table contents.
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TBD: new repo, or perhaps re-use data repo to keep private?
Repo should have:
* SOPs for adding content including TSV specs and folder locations
* processing code calling KB_tools + some stand…
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I followed the website tutorial and downloaded the following files:
gl.download_ref("1kg_dbsnp151_hg19_auto")
GCF_000001405.25.gz
GCF_000001405.25.gz.tbi
I followed the instructions step by step…
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Testing this latest version [digest dacb63f2c33d](https://hub.docker.com/layers/eliearnaud/metashark/latest/images/sha256-dacb63f2c33d565010c47a327c5e55813ec62e2142ee05471b04dec457aa8d5d?context=explo…
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## Format: TD5-TSV
All IBP-traits should have a TSV as well as .xls
My script only takes .tsv in TD5 layout.
Any xls to be included in the merged TO must have the tsv. Later we can explore an autom…
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Hi
I have been trying to run the trained model `natlang_model.bin` on the ParaRules dataset but the error is coming as it is not able to find the file `turk-questions-test-mappings.tsv` in the data…
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## Current Behavior
It is possible to create a measurements JSON where one or more data values are `NaN`, causing Auspice to fail to load the measurements JSON with the following errors:
![image…
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**Is the bug primarily related to salmon (bulk mode) or alevin (single-cell mode)?**
Alevin single-cell mode.
**Describe the bug**
Hi, I bumped into a problem following this tutorial [https://com…
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The parser in `neo4j-data-generation` triggers warnings for missing `*SVG.tsv` files. A temporary choice was made regarding how to deal with these. We should have a more intentional plan regarding the…
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When the cursor is in a comment in a code chunk (Quarto) some keybindings do not work:
- `RSendChunk` fails with `Not inside an R code chunk`
- `RPreviousRChunk` does nothing. Weirdly enough, if t…