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### High priority
- [x] Add a WSI reader (read a wsi into Xarray and then transform to a SpatialData object)
- [x] Add whole tissue segmentation + conversion to a `shapely` polygon
- [x] Support m…
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I am looking at the slurp file : https://github.com/monarch-initiative/mondo-ingest/blob/main/src/ontology/slurp/doid.tsv
Many of the terms in this list (suggested to be new terms in Mondo) already…
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I am looking at this file src/ontology/slurp/omim.tsv (on Feb 12th, 2024).
I expected some terms to have parents that exist in Mondo (based on being part of a phenotypic series), but they did not.…
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Add support for either paging or a "maxNumReplies" field
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**Needed Scripts:** Write a script that converts mappings into RDF
@nicolevasilevsky -- thank you for meeting with me a few weeks ago and confirming our approach looks reasonable. I am just docum…
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Time: July 6th (12 noon UK, 1pm EU, 9pm Aus) [Timezones](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2023&month=7&day=6&hour=11&min=0&sec=0&p1=43&p2=136&p3=37&p4=771&p5=235&p6=152&…
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While finalising the nature of Sue Charman's contribution I noticed that we are not currently mentioning the metID work that was done originally (report is [here](https://github.com/OpenSourceMalaria/…
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See #22, #23, #26, #27, #28, #29 for the previous issues. cc @connorjburgin
The biggest disagreement here is around the platyrrhine generic splits. There is also a difference in family-level taxono…
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EFO [Release v3.25.0](https://github.com/EBISPOT/efo/releases/tag/v3.25.0) contains the following OWL files:
- `efo-base.owl` 60.8 MB
- `efo.owl` 175 MB
- `efo_otar_profile.owl` 147 MB
- `efo_ot…
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See [spreadsheet](https://docs.google.com/spreadsheets/d/1LzszXSZACiwizWiuk3ctFLHGjG8JUwr5/edit#gid=928103981)