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### Description
Calculating Moran's I with multiprocessing creates error in reduction step.
squidpy==1.0.0 and latest master
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### Minimal reproducible example
```python
sqgr.moran( adata=…
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### Description
Error when loading the data. @giovp did you update it? If yes, did you update any more?
### Minimal reproducible example
```python
import squidpy as sq
adata = sq.datasets.fou…
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### Type of the feature
- [x] New function in `sqduipy.im`?
- [ ] New function in `squidpy.gr`?
- [ ] New function in `squidpy.pl`?
- [ ] Change an existing functionality, such as default behavi…
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The caching steps are already on the CI, I just need to know the data that will be used in the tutorials.
All the data is going to be cached in `~/.cache/squidpy`. We can change the location to e.g. …
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on my image_tutorials branch, creation of docs fails with `TypeError: object.__new__(ImageFeature) is not safe, use str.__new__()`
I am calling `tox -e docs` (I also tried py37, but this fails with…
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just dropping a brief bug report here, concerns #239 @giovp
`sq.im.calculate_image_features(adata, img, features="summary", key_added="features", n_jobs=4)`
```
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After #14 , some small clean-up is necessary:
- [x] remove the `plotting` section of the examples
- [x] spell/link check everything
- [x] remove dummy examples
- [x] reorder examples/tutorials
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fancy to see that what started during the hackathon is now grown up and has it's own readthedocs 😊
noticed some minor stuff when randomly looking through it, maybe interesting, if not resolved by an…
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### Type of the feature
- [ ] New function in `sqduipy.im`?
- [ ] New function in `squidpy.gr`?
- [ ] New function in `squidpy.pl`?
- [ ] Change an existing functionality, such as default behavi…
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Hi All!
Here's a brief list of examples that we need to add to the repo. We'll really use your help to populate the example folder. Here's a description of the workflow to get you started.
### S…
giovp updated
3 years ago