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Under this issue we can collect all ideas for enhancing the user-friendliness of refineGEMs.
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**Suggestion regarding the YAML file:**
Create an example YAML file with all modules that can be use…
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@GwennyGit mentioned that some people might want to use all model-modifying functions at once.
I realised that using only the functions for multiple models might be desirable.
The `main.py` and …
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Based on the growth rates we were seeing, Daniel asked if there is a maintenance reaction in the model, I wasn't sure.
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The QotM identified a data gap related to ChemicalEntity – BiologicalProcess relationships. For example, a SME requested this information to identify mechanistic explanations for the observation that …
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See equation (4) on the published page here
https://mufan-li.github.io/auffinger_chen/
It seems that all equations are being rendered correctly except for when I use the align environment like thi…
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## Checklist
- [ x] I'm asking a question
- [x ] I've looked through the README and FAQ for similar questions
- [ x] I've searched the bugtracker for similar questions including closed …
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### Problem description
https://github.com/docker/swarmkit/pull/2246 stops generating and storing keys in PKCS1 format and stores them in PKCS8 format instead. Older versions of docker can read un…
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### Description
Dear Deepspeed
I have some issue when using model parallel(inference engine)
sometimes gpu utilization is fixed to 100% and code is hanged
so i made test code and test deepspeed …
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**Question**
Hi There, I am trying to test out the chip-set pipeline using a single sample of paired end data but the workflow keeps failing at a specific point with the following error:
Activatin…
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Trying to load the latest `universal_model.json` file from BiGG returns the following error:
```
~/opt/miniconda3/envs/py37/lib/python3.7/site-packages/cobra/core/object.py in annotation(self, ann…