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work on cmf is in progress per Mark Engelstad and is known to need homepage, description, product, license.
rvita updated
2 years ago
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While the Bioregistry already supports the usage of different "profiles" depending on if you're in ontology world (e.g., you want to use OBO PURLs), if you're in the systems biology modelling world (e…
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Similar to #1687, Shields.io will generate all sorts of nice badges that give summary-level information on repositories that can be formatted in using the following markdown:
```markdown
![GitHub …
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https://github.com/bioregistry/bioregistry/blob/generalize-prefixe-maps/docs/_data/contexts/obo_context_synonyms.jsonld
@cthoyt thanks
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As a follow-up to #1635, it's worth noting the Bioregistry is tracking conflicts between the OBO Foundry's license metadata (which is manually curated) and the OLS's license metadata (which I think is…
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- [ ] http://www.geneontology.org/formats/oboInOwl#hasDbXref should be use in example, no DbXref (wrong).
- [ ] `oio` is another widely used prefix of http://www.geneontology.org/formats/oboInOwl#, b…
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The only issue is that because Identifiers.org is broken, this might not work
```python
def get_resolver(self, prefix: str, identifier: str) -> Optional[str]:
"""Get the resolver stri…
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The dependencies are a bit heavy:
https://github.com/biopragmatics/bioversions/blob/5440e5aecad7d1c72e905c07a140389967c4ff9e/setup.cfg#L45-L60
I imagine this is because these dependencies are re…
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Throughout the model, we have mappings like: "UMLSST:phsf" that use broad UMLS categories(?) as a sort of identifier. I'd like to propose removing them as they don't resolve.
Are they critical f…
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For example, `inchikey` would map to [P235](https://www.wikidata.org/wiki/Property:P235)
egonw updated
2 years ago