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### Troubleshooting docs
- [X] My problem is not solved in the Troubleshooting docs
### How did you install Mamba?
Mambaforge
### Search tried in issue tracker
yes
### Latest version of Mamba
-…
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Dear TypeTE authors.
Thank you for providing this tool to the scientific community.
We are using WES data. MELT works on WES data. We tested several other tools to call TE, and most of them do not…
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`funannotate-docker mask -i DNA_clean_sort.fa -m repeatmasker -s Viridiplantae -l ../../Database/Libraries/RMRBSeqs.embl`
#ERROR
[Oct 09 01:03 PM]: OS: Debian GNU/Linux 10, 80 cores, ~ 264 GB RAM. P…
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Dear Shujun,
I have encountered a problem with the LTR_retriever program, and Robert @rmhubley pointed out it is related to data passing in a multithreaded run. According to my sight, it is widely …
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Dear RepeatMasker friends,
We are having an issue with RepeatMasker never ending the postprocess.
We are working with an assembly that contains chromosomes that are above 1 Gbp and I am wondering…
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Hi,
Thank you for making earlGrey. I tried to use it through gitpod and wanted to include RepBase.
I uploaded `RMRBSeqs.embl` and `RMRBSeqs.embl` in `/workspace/conda/envs/earlGrey/share/RepeatMas…
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# Current versions and available ones
## Major
- [x] RepeatModeller 1.0.11-> [2.0.3](https://bioconda.github.io/recipes/repeatmodeler/README.html)
## Minor
- [x] RepeatMasker open-4.0.9 -> [4.…
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Questions:
- When to deprecate ? Options:
-- when it is EOL (currently python 2.7 and 3.6)
-- when we stop building wheels for it (currently python 2.7, 3.6, 3.7, we build wheels for the latest 3…
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**Feature request description**
Options line for these two programs, especially to allow control of RNG seed for repeatability
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Hello,
I would like to request the installation of RepeatModeler (https://github.com/Dfam-consortium/RepeatModeler, http://www.repeatmasker.org/RepeatModeler/) and RepeatMasker (https://www.repeatm…