-
Much of the VIC code has comment blocks at the top that contain the information that basically is the same (or similar) to what would be in a commit message. For example, the header in global.h states…
-
I tried to get media from ecoli_pickle with cobrapy(GitHub HEAD), but it seems
it does not contain "media_compositions".
Is there any way to set "media_compositions" to ecoli model?
``` python
In…
kozo2 updated
10 years ago
-
After simulating a model, I want to update a parameter value, and have the simulation continue from where it left off (i.e. all state variables retain the values they had, using them as the initial va…
-
_From [andre.knoerig@gmail.com](https://code.google.com/u/andre.knoerig@gmail.com/) on October 22, 2009 03:54:19_
This is a space for Fritzing users to upload and share their self-created
parts with…
-
I am a newbie in python. When I run the 'pn = OpenPNM.GEN.Cubic(divisions=[10,10,10],lattice_spacing=.0005,loglevel=20,btype = [0,0,0]).generate()'
The result is that pn is nonetype. Could anyone tel…
-
Consider this rate from the RMG-Java database, Glarborg C2 seed mechanism
```
Unit:
A: mol/cm3/s
E: cal/mol
CH3OH (+M) = CH3 + OH (+M) 2.1E18 -0.6148 92540 0.0 0.0 0.0
N2/1/…
rwest updated
12 years ago
-
Running with DASSL AUTO but no pruning.
My understanding is that dassl should interrupt the simulation if the critical flux is exceeded.
At the end of the simulation, the java code checks for validity…
rwest updated
13 years ago
-
Procedure:
1. run a job that doesnt prune until it has 33k edge species, and save the restart files
2. restart the job, this time with pruning limited to 30k edge species
3. it restarts ok, prunes ok,…
-
I just got this, and am not sure what to do about it:
dupreaction_set[CH4(13) + O2(2) --> CH3(14) + HO2(7)]
jing.rxn.PDepException: Tried to determine nonincluded isomer with maximum leak flux, but…
rwest updated
14 years ago
-
The end of the log file states this:
Reaction System 1 has not reached its termination criterion
although it seems to be valid (complete), so it was not interrupted for being invalid.
This probably …
jdmo updated
14 years ago