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Jaweria asked how to query for 'good' ephys sessions. Collecting the various notebook tutorials in iblenv would help, also adding a section about Alyx queries that include spike QC?
k1o0 updated
2 months ago
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Hey, I found InterpolateMotionRecording in new version of spikeinterface requires motion object as one of the variable, not just a numpy array as displacement.T. Also, border_mode are set to default…
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**Describe the bug**
Hello. After acquired data with an Intan, I would like to use Elephant for the first treatment of these.
In this way, I would like to fill the spiketrain object of neo using t…
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All sorters have been tested with Singularity. We should also test wiht Apptainer since this will be the long-term supported version
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References: #1602
https://tanstack.com/table/latest/docs/guide/sorting
Define what the function needs to be that is passed to `sortingFn` such that the end user can define their own custom sorting fu…
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I have no issues sorting and preparing the output to Phy using Kilosort4 (all default settings) via the Docker container with SpikeInterface. When I run phy trace-gui params.py there is no issue, but …
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Hi,
I'm transitioning from waveform extractor to SortingAnalyzer.
But I'm having problem accessing the saved files.
In my pipeline, I integrate spikeinterface output with UnitMatch that I loa…
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I have a question regarding the use of spikeinterface that I know could seem a little "obvious": I started to use this tool just a few days ago, trying to run spike sorting with various sorters, sta…
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I'm trying to compare mountainsort4 and 5. However, mountainsort5 returns zero units (where mountainsort4 returned ~80 units). It seems to run fine in docker, but after a few minutes it quits and acts…
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I'm running into trouble with the below code:
```
import spikeinterface as si
# Generate curated sorting
recording, sorting = si.generate_ground_truth_recording() # num_channels=64
sorting…