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Similar to #1687, Shields.io will generate all sorts of nice badges that give summary-level information on repositories that can be formatted in using the following markdown:
```markdown
![GitHub …
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https://github.com/bioregistry/bioregistry/blob/generalize-prefixe-maps/docs/_data/contexts/obo_context_synonyms.jsonld
@cthoyt thanks
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As a follow-up to #1635, it's worth noting the Bioregistry is tracking conflicts between the OBO Foundry's license metadata (which is manually curated) and the OLS's license metadata (which I think is…
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- [ ] http://www.geneontology.org/formats/oboInOwl#hasDbXref should be use in example, no DbXref (wrong).
- [ ] `oio` is another widely used prefix of http://www.geneontology.org/formats/oboInOwl#, b…
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The only issue is that because Identifiers.org is broken, this might not work
```python
def get_resolver(self, prefix: str, identifier: str) -> Optional[str]:
"""Get the resolver stri…
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The dependencies are a bit heavy:
https://github.com/biopragmatics/bioversions/blob/5440e5aecad7d1c72e905c07a140389967c4ff9e/setup.cfg#L45-L60
I imagine this is because these dependencies are re…
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Throughout the model, we have mappings like: "UMLSST:phsf" that use broad UMLS categories(?) as a sort of identifier. I'd like to propose removing them as they don't resolve.
Are they critical f…
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```yaml
[Term]
id: hgnc:5956
name: IHH
def: "Indian hedgehog signaling molecule" [pubmed:7590746, pubmed:14770182]
xref: ccds:CCDS33380
xref: ena:L38517
xref: ensembl:ENSG00000163501
xref: mer…
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For example, `inchikey` would map to [P235](https://www.wikidata.org/wiki/Property:P235)
egonw updated
3 years ago
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In PATO, for example, we can find:
http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=
bioregistry only has:
https://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=
(htt…