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Try CMake (since we want to move in that direction later).
See how SDSL-lite builds its cheatsheet.
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For when speed is more important.
Should be easy to change the sdsl vector type in the de bruijn graph template parameters
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One of my students has found a bug in `cst_sct3.hpp` that caused runtime failure for gcc 4.9 and clang 3.5.0 when using the `-O0` debug optimization.
Here is a patch that also changes `children` to a …
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Just a small typo:
```
diff --git a/include/sdsl/bits.hpp b/include/sdsl/bits.hpp
index b13fe79..2d6a035 100644
--- a/include/sdsl/bits.hpp
+++ b/include/sdsl/bits.hpp
@@ -104,7 +104,7 @@ struct bits…
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The directory and function signature for baseline for filenames is different in OS X vs Linux.
sdsl-lite has a cross platform baseline function I believe. Search on github.
Test build it in a clean …
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Hi Simon,
the test IntVectorMapperTest catches an assert abortion in Debug Mode.
Stacktrace is:
```
#0 0x00007ffff7241967 in raise () from /usr/lib/libc.so.6
#1 0x00007ffff7242d3a in abort () from…
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**Don't worry about polymorphism just yet. Can be fixed up later, but not needed in this paper.**
- [x] Compile code with hypergraph (no additions, composition only)
- [x] ctor that takes WT and DBG (…
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The error occurred in the following way:
I create a suffix tree for the word 'mississipi', then I traverse to the child node 'i' of the root and want to output the children of this node. Hence I wrote…
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First, I want to thank you for this great library.
I want to use a cst_sct3 cst
to index the human genome: 3095677412 characters. With g++ (GCC) 4.8.2, Intel Xeon X7560 @ 2.27GHz and 1TB of RAM. I g…
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Usually it is hard to debug your code with gdb, since it does not show the contents of std containers or sdsl types. However, it is possible to write a gdb-script to show the contents.
Here an example…