-
largest intervals are labeled as if they were the smallest ones.
EXAMPLE:
>siarproportionbysourceplot(model1,prn=TRUE,grp=1,probs=c(25,75))
Plot of proportions by source
This requires more th…
-
I ran a WDL file locally, by first creating a gatk jar and building a Docker image on my computer and then executing the WDL using Cromwell. I ran the following commands:
./gradlew shadowJar
docker …
-
Hello guys, I'm quite new to the forecasting world, so I hope you will apologise me for any mispractice.
I have decided to try out this really promising library, by installing it in R.
Unfortunat…
-
I think we can aim to submit by 3pm (or earlier), unless anything major comes up.
My plan is:
1. Merge Aaron's, and check the numbers match. DONE (see comment on his commit though).
2. Compare h…
-
Implement the following summary statistics for the sampled paramaters in the output `mcmc.txt` file:
* mean
* median
* standard deviation
* minimum
* maximum
* 2.5 % credible interval
* 97.5 % …
-
@samuelklee commented on [Wed Oct 19 2016](https://github.com/broadinstitute/gatk-protected/issues/750)
Tool for inferring mixture of CNV subclones from ACNV output.
- [x] Develop resources for simu…
-
Hi Andrew,
Is it possible to quickly call the mean/mode and CI values of SEA.B for a particular model? Similar to siarhdrs() in siar.
Cheers,
B
-
@samuelklee commented on [Mon Oct 05 2015](https://github.com/broadinstitute/gatk-protected/issues/126)
Some possible enhancements/improvements, in no particular order and of varying scope:
-Change …
-
I am experiencing tracking inaccuracies with rtorrent 0.9.4 and a private tracker when the (per rutorrent) "Last Updated" time (per rutorrent) is the same for a number of torrents. Torrents become sy…
-
We should manually review calls for DOIs to see the accuracy of the `full_text_indicator` calls. I'd suggest randomly selecting 100 DOIs where full_text_indicator=False and 100 DOIs where full_text_in…