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**Is your feature request related to a problem? Please describe.**
Related: https://github.com/rapidsai/cugraph/issues/187
class Graph (defined in c_graph.pyx) stores a graph and provides function…
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Louvain method is not working, you obtain one user per community
![communityid](https://cloud.githubusercontent.com/assets/4763025/20521501/d704d208-b0ab-11e6-95fa-380e67951191.png)
rebla updated
4 years ago
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**Describe the bug**
The experimental RF backend crashes with an exception `raft::cuda_error`.
Output:
[W] [19:16:40.163584] Using experimental backend for growing trees
[W] [19:16:43.017118] …
hcho3 updated
3 years ago
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AxisError was encountered while executing the regress_out function following the pbmc3k tutorial
...
```python
sc.pp.regress_out(adata, ['n_counts', 'percent_mito'])
```
```pytb
regress…
naity updated
4 years ago
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## Setup
Install snakemake into your conda environment
```
conda install -c bioconda -c conda-forge snakemake
```
+ Switch to `metrics_fixes` branch.
+ Go to the `scripts` folder. You will find …
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Test run on human_pancreas hvgs = 0
```
human_pancreas_norm_scvi_hvg0_err.txt
Traceback (most recent call last):
File "/home/icb/daniel.strobl/Benchmarking_data_integration/scripts/runIntegratio…
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### Background
[clusterMaker](http://apps-dev.cytoscape.org/apps/clustermaker2) is a [Cytoscape](http://www.cytoscape.org) app that unifies different clustering techniques and displays into a singl…
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**Describe the bug**
I was unable to run the algorithms.big_clam algorithm in a graph with 2436844 edges, receiving a MemoryError.
**To Reproduce**
I'm instantiating my graph from a data frame wi…
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With the new `batch_key` option in `highly_variable_genes` downstream functions like PCA can fail silently with the old defaults. The same is true for `sc.pl.highly_variable_genes(adata)` which curr…
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Hi Frank can you update our website with these activities? Thank you!
1) Iris Output and Activities → Presentations → Presentation to academic audiences
2019
Plonsky, L. (2019, September). Min…