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_From [zhengj2...@gmail.com](https://code.google.com/u/100840849128868144328/) on June 03, 2013 13:27:54_
Beta Cell Genomics Ontology (BCGO) is an application ontology built for the Beta Cell Genomic…
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ENVO imports BFO, as a result some terms such as the one below end up being non-compliant to the OBO spec:
- more than one definition
- duplication of information (see disjoint_from: BFO:0000020 b…
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```
the current release has many object properties that hold over BFO:0000051
(has_part), but this seems to be missing from BFO now:
http://purl.obolibrary.org/obo/BFO_0000051
this needs to get fix…
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**Describe the bug**
When using RDFDumper().as_rdf_graph(), the `contexts` parameter is not taken into account when parsing the graph as rdflib jsonld. I think you first need to merge the context wit…
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A general issue to raise concerns with the current imports. A secondary goal for this issue is to establish a protocol for future imports into SDGIO.
@pbuttigieg @cmungall I would like to aid in reso…
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For example, a search on 'has part' returns a BFO hit, but the "Ontology:" field tends to list some ontology that isn't BFO. I think it is safe to say prefix of term should force selection of matchin…
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The axiom "regions-precede-if-they-meet", [suk-1], says, in prover9 syntax:
> all i1 all i2 all l1 all f2 ((((-(bfoiof(i1,tinstbcat,i1))) & (-(bfoiof(i2,tinstbcat,i2))) & (lastInstantOf(l1,i1)) &…
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The classes in CARO 2 should be aligned with [BFO classes only](http://purl.obolibrary.org/obo/bfo/class-only.owl)
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**Describe the bug**
The definition reads:
> b located in c =Def b is an independent continuant & c is an independent & neither is a spatial region & there is some time t such that the spatial r…
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This is emerging as the standard for units on the semantic web: http://qudt.org/
How does this affect PATO? Here are some possibilities:
1. We ignore qudt, as it's not OBO-esque (e.g. units and 'attr…