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Hello,I want to replicate your experiential ,but no function **_plot_confusion_matrix_** in the data_utils , can you help me?
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### Hello !
I downloaded for the Camelyon17 dataset your trained model from CodaLab (ERM and seed0). I have installed all packages correctly according to your readme and load the model as follows:
…
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I try
```python
import multiresolutionimageinterface as mir
reader = mir.MultiResolutionImageReader()
mr_image = reader.open('camelyon17/centre_0/patient_000_node_0.tif')
```
there is no error …
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Running Ubuntu 16.04 via VMware on a Macbook Pro.
Tried in both Terminal and Jupyter NB.
I believe all env variables and directories are in order.
when I run:
```
import multiresolutionimag…
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每個xml所產生的mask.tif經過computeEvaluationMask皆只有返回一個腫瘤
ex . test_004.xml具有3個腫瘤註釋,但是生成的mask tif文件返回1個腫瘤
xml to tif
reader = mir.MultiResolutionImageReader()
mr_image = reader.open('../images/test_021.t…
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您好,通过阅读您的代码,有一些小问题想请教。
1.wsi_classification.py中,使用的是tumor和normal进行分类。但是我看原挑战中的描述为:
First Evaluation: Participants need to provide a single CSV file, with the first column corresponding to the name o…
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您好,我想请问一下,按照您的说明进行获取补丁图像的第2步,源数据文件及路径都没错,但是运行tumor_mask.py时总报错(第1步,tissue_mask.py可正常运行处理),请问这可能是什么原因造成的,需要怎样处理解决?![image](https://user-images.githubusercontent.com/55268529/91560285-2e416980-e96c-11ea…
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Hello, I have just started my research on Camelyon17, and I would like to ask you about the **GPU memory and time** you need to train the whole data set.
Thank you very much!
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I am working with .tif files from the CAMELYON16 Dataset and that does not provide any rule files, can I still use this tool to generate hundreds/thousands of patches from each tif file?
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Hi Rebecca,
Your package is very help.
Could you provide a pointer for sample data?
I used a downloaded .svs. What xml file should I provide? Could you provide an example?