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Hi,
I’m using SpliceWiz version 1.7.5, installed via devtools. When I ran the buildRef command, I encountered the following error: "Error in match.arg(type): 'arg' must be NULL or a character vecto…
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https://bioentity.link//#/publication/10.1534/g3.119.400544
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I am trying to align paired-end reads from Drosophila melanogaster to a reference DM6 genome.
I have run into the error several times when I ran the following command:
/Volumes/LAB/bowtie2-2.3.4.3…
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Hi @mugitty!
Creating this ticket for tracking how we want the PAINT curation tool and validator to respond when taxon constraints are violated (TC invalid). The requirements:
1. Display TC inva…
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https://doi.org/10.1145/2783258.2783304
> A central theme in learning from image data is to develop appropriate image representations for the specific task at hand. Traditional methods used handcra…
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- Keightly 2005:
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1240079/
- intro explains some of the problems associated with identifying conserved noncoding elements (CNEs)
- Siepel 2005:
- htt…
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Very cool repo!
Wasn't sure if the issue list is appropriate, but [Here](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5806122/) is a paper that you might find interesting. Involves the construction …
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### Describe the bug
When running harpy align on a sample named C3-flyS3-10477404-22NLWYLT3-L2_trimmed_R1.fastq.gz I get an error saying Logfile Align/bwa/logs/C3-flyS3-10477404-22NLWYLT3-L2_trimmed.…
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Hi
I am trying to run clipper on Drosophila data, providing a GTF instead of a species -s option.
(Cou you provide information on how to construct a species file for other model organism)
In a test …
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dianeoinglis commented on Sep 3, 2016 for Issue #180
Thank you so much! These are awesome. For just a bit more awesomeness, there are two more host-types to create terms for.. Non-vertebrates (or…