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More an planemo / galaxy issue but I guess its good to keep track here:
```
Applying linter xml_order... CHECK
.. INFO: Unknown tag [xrefs] encountered, this may result in a warning in the future…
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What should be the choice of topics for 'the field of research?'
Last year I used the categories from the Bioinformatics journal but this is rather limited.
EDAM seems to be the only actively develope…
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class Edaflow(object):
...
def configure_tools(self, graph):
def merge_edam(a, b):
# Yeah, I know. It's just a temporary hack
return b
It's a tempora…
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Many of the objects use a struct called `Isset` in the `Evernote.EDAM.Type` namespace. However, these types are different depending on which type they are nested in e.g. Evernote.EDAM.Type.Notebook an…
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I think it'll be great to update most of the links to browsing EDAM in the NCBO BioPortal from https://bioportal.bioontology.org/ontologies/EDAM to https://bioportal.bioontology.org/ontologies/EDAM?p=…
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### Task Description
Currently the Taxonomy Importer uses a collection of local terms listed below. These were originally part of an organism_property cv but are now part of the local cv.
- line…
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This is placeholder for a **long-term, conceptual enhancement** issue that is common between EDAM and EDAM-bioimaging.
Please read and write more in https://github.com/edamontology/edam-bioimaging/…
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### Simulation tool
### Simulation tool
---
id: vcell
version: 7.5.0.27
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.6.0.27/biosimulators.json
specificationsPatc…
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Collecting the high priority issues for my next pass at the tool shed. These issues are independent of the broad "delete tens of thousands of lines of code" task that would follow updating the main to…