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### What happened?
I'm using fMRIPrep to process HCP-YA data, which includes single band reference (SBRef) images. However, I've noticed that the SBRef images were not utilized during the motion co…
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The actual math goes way over my head, but it doesn't seem like patch-denoising includes a way to use noise scans with the NORDIC denoiser. The documentation mentions "pre processing the image and div…
tsalo updated
1 month ago
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Hi,
I just wanted to inform you that I had some problems importing the confounds.tsv files from a fmriprep-dataset.
This is a name of an example bold-file:
sub-01_ses-1_task-rest_run-1_echo-1_spa…
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we need to add anatomical processing if freesurfer hasn't been run. Let's use the same one as fmriprep: https://github.com/poldracklab/fmriprep/blob/master/fmriprep/workflows/base.py#L409-L466
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### Which module are you suggesting enhancements?
(Write your answer here: beh, datalad, fmriprep, mriqc, physio, qcplot, redcap)
### Is your feature request related to a problem? Please describ…
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I am running the following command:
docker run -ti --rm \
-v /Users/neurolab/Desktop/Test_sub_002_fcmriprep_ciftify:/data:ro \
-v /Users/neurolab/Desktop/Test_sub_002_fcmriprep_ciftify:/o…
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### Your idea
### Related to
Related to https://github.com/openjournals/joss-reviews/issues/7061
### Rationale
#### Clarify input data requirements
I'm unclear on what is necessary / requ…
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In the context of the review [(https://github.com/openjournals/joss-reviews/issues/7061 )], I am trying to run the giga connectome on one publicly available subject ([(https://zenodo.org/records/57908…
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```
Retrieved anatomical reference mask
Use standard template as functional scan reference.
Calculate the anatomical dice score.
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