spatialtopology spacetop-prep issues

spatialtopology / spacetop-prep

code for transferring data and preprocessing

MIT License

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issues

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[BUG] listing of acquisitions for which repopulation of intendedFor might "remove" some volumes

#95 yarikoptic opened 1 month ago
0
[BUG] sub-0147_ses-04_task-fractional_acq-mb8_run-01_desc-posner_events.tsv

#94 jungheejung opened 1 month ago
0
[DUP] BIDS validator issue 08: varying lengths of alignvideo

#93 jungheejung opened 1 month ago
0
[DUP] BIDS validator issue 07: non-converted subject

#92 jungheejung opened 1 month ago
0
[DUP] BIDS validator issue 06: TR length difference

#91 jungheejung opened 1 month ago
0
[DUP] BIDS validator issue 05: events file

#90 jungheejung closed 1 month ago
1
[DUP] BIDS validator issue 04: weirdly renamed dups

#89 jungheejung closed 1 month ago
1
[DUP] BIDS validator issue 03: stimulus sharing

#88 jungheejung closed 1 month ago
1
[DUP] BIDS validator issue 02: IntendedFor for deleted dup files

#87 jungheejung opened 1 month ago
1
[ERR] BIDS validator issue 01: odd duplicate names

#86 jungheejung opened 1 month ago
3
[DUP] IntendedFor remove dups

#85 jungheejung opened 1 month ago
0
[DUP] sub-0034_ses-04_task-fractional_acq-mb8_run-01_bold

#84 jungheejung closed 1 month ago
0
[DUP] sub-0075_ses-03_task-shortvideo_acq-mb8_run-01

#83 jungheejung closed 1 month ago
0
[DUP] sub-0128_ses-04_task-social_acq-mb8_run-05

#82 jungheejung closed 1 month ago
1
[DUP] sub-0064_ses-02_task-faces_acq-mb8_run-02

#81 jungheejung closed 1 month ago
0
[DUP] sub-0041_ses-02_task-faces_acq-mb8_run-01

#80 jungheejung closed 1 month ago
1
[DUP] sub-0133_ses-04_task-social_acq-mb8_run-01

#79 jungheejung closed 1 month ago
0
[BUG] _events durations might still be empty instead of a number of n/a

#78 yarikoptic closed 1 month ago
1
[BUG] sub-0005 ses-04 missing fractionals run-1

#77 bogpetre opened 1 month ago
2
[BUG] more dups to clean

#76 yarikoptic closed 1 month ago
1
[BUG] spurious sub-0019/ses-19 generated by ./code/spacetop-prep/spacetop_prep/events/bidsify_fractional.py

#75 yarikoptic closed 1 month ago
2
some fresh dups to deal with

#74 yarikoptic closed 1 month ago
1
[BUG] behavioral files

#73 jungheejung opened 3 months ago
0
[ENH] BIDS behavioral file for documenting mouse trajectory onset time

#72 jungheejung closed 1 month ago
1
[DUP] sub-0122_ses-03_run-01_fmap

#71 jungheejung closed 3 months ago
1
[DUP] sub-0092_ses-01_run-01_fmap

#70 jungheejung closed 3 months ago
1
[DOC] mouse trajectory data description

#69 jungheejung closed 1 month ago
0
[MISSING DATALAD] sub-0103_ses-02 missing

#68 jungheejung closed 1 month ago
7
[DOC] ultimate datalad mermaid figure

#67 jungheejung opened 4 months ago
3
[DUP] sub-0132_ses-01_acq-MPRAGEXp3X08mm_T1w__dup-01

#66 jungheejung closed 3 months ago
2
[DUP] log of removed dups after matching TRs

#65 jungheejung closed 4 months ago
0
[DUP] sub-0082_ses-01_task-social_acq-mb8_run-01

#64 jungheejung closed 4 months ago
1
[DUP] sub-0044_ses-04_task-fractional_acq-mb8_run-01

#63 jungheejung closed 4 months ago
1
[DUP] sub-0084_ses-04_task-fractional_acq-mb8_run-01

#62 jungheejung closed 4 months ago
1
[DUP] sub-0097_ses-01_task-alignvideo_acq-mb8_run-01

#61 jungheejung closed 4 months ago
1
[DUP] sub-0038_ses-03_task-shortvideo_acq-mb8_run-01

#60 jungheejung closed 3 months ago
1
[DUP] sub-0038_ses-02_task-narratives_acq-mb8_run-01

#59 jungheejung closed 4 months ago
1
[DUP] sub-0041_ses-03_task-social_acq-mb8_run-02

#58 jungheejung closed 4 months ago
1
[DUP] sub-0133_ses-04_task-social_acq-mb8_run-01

#57 jungheejung closed 3 months ago
5
Duplicated data file

#56 feilong closed 4 months ago
1
An issue about d_beh repo

#55 Zizhuang-Miao closed 1 month ago
5
Add reproducible scripts and move original scripts to the "old" folder

#54 Zizhuang-Miao closed 4 months ago
1
[BUG]sub-0133_ses-01_anat, fmap

#53 jungheejung closed 4 months ago
4
OpenNeuro dataset preparation

#52 yarikoptic opened 4 months ago
0
add two scripts used to generate events files in the func folders

#51 Zizhuang-Miao closed 6 months ago
0
[BUG] utils.preprocess.identify_boundary misses boundaries if physio starts or end mid-scan

#50 Michael-Sun opened 8 months ago
0
[BUG] c02_save_separate_run.py

#49 Michael-Sun opened 8 months ago
1
[ENH] Session/Run arguments for c02_save_separate_run.py

#48 Michael-Sun opened 8 months ago
0
[BUG] Gifify opens images but does not close them

#47 Michael-Sun closed 1 month ago
0
[BUG] KeyError 0 returned when attempting alignment check of tonic/phasic EDA: nk.events_plot(event_stimuli, scr_processed)

#46 Michael-Sun closed 8 months ago
1