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Hello @sidhomj,
I used the unsupervised partof DeepTCR to cluster TCR sequences, but when I allowed the method to determine the optimal threshold parameter with the following command line, I got t…
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Dear all,
I have tested scgenome.snvphylo.snv_hierarchical_clustering_figure function:
+ Function work well with 1 library data (snv_data, snv_count_data) as input.
+ But if I combine many …
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## **Related Problem & Feature Request**
### **Related Problem**
In the official [**Grid2Op repo**](https://github.com/rte-france/Grid2Op); a Multi-Agent Reinforcement Learning(MARL) example is …
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Thanks for this excellent package.
I was wondering if you could add a feature so that users could click on a branch of the tree to select a subset of genes.
Thanks.
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Medoid linkage (there are actually multiple with this name, unfortunately) is inspired by the well-known k-meodids clustering concept (Partitioning Around Medoids, PAM), but in a hierarchical way inst…
kno10 updated
4 months ago
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Is it within the scope of this package to provide some more modern HC techniques (e.g. ROCK/CURE, BIRCH, etc)? Classical HC techniques (single-linkage, centroid linkage, etc) lack robustness and are s…
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Querying a hierarchical clustering index for the nearest neighbor with SearchParams.checks set to FLANN_CHECKS_UNLIMITED gives wrong results.
The problem can be solved by changing lines 431 and 618 o…
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e.g. like http://datanongrata.com/2019/04/27/67/
going from
![image](https://github.com/sourmash-bio/sourmash_plugin_betterplot/assets/51016/e58d52b8-6329-4267-a9be-f6216b0fc661)
to
![ima…
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### Basic information
* My operating system and version: Windows 11
* My mzmine version: mzmine 4.0.8
### What happened
I am currently working with the GC-MS workflow in mzmine and have a do…
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What:
This would be a new function or set of functions which would take a set of trees (all trees?) and divide them into groups based on some measure.
Title:
cluster (could use a better name?)
Inpu…