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Hey,
Currently the visualisation seems to have some errors and provides no output.
Best,
Tom
`mobmess visualize -s test-contigs.fa -a test-contigs-annotations.txt --contigs $contigs --thread…
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Hi all,
following up an issue I created [over at ezomero](https://github.com/TheJacksonLaboratory/ezomero/issues/109), I am having some trouble uploading zarr to our omero server.
I created a te…
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A separate issue from the results in #64 is that 0.5-0.8% of markers could not be mapped from hg19 to hg38. While I think some percentage will be skipped anyway. Do you have any suggestions to reduce …
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Pims cannot download `loci_tools.jar` when using bioformat, it seems it does not exist since version version 6.9 of bioformat:
(see https://downloads.openmicroscopy.org/bio-formats/6.9.0/artifacts/ )…
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[QA 30330](https://www.openmicroscopy.org/qa2/qa/feedback/30330/)
```
java.lang.Exception: Abnormal termination due to an uncaught exception.
java.lang.NoClassDefFoundError: loci/common/services/De…
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https://github.com/dennisdong123/finalproject/blob/73247ca5ffe147d26a595a970145d460035a29e6/2.filter.Rmd#L12-L28
I am closely following https://github.com/jdalapicolla/LanGen_pipeline_version2
But…
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I have called a bunch of samples with straglr and merged the (chrom, start, end, motif) beds into one unified bed. I would like to use this merged bed to genotype each sample again. Sometimes differen…
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hello, I am trying to follow the pipeline to find the optimal cluster threshold. For this I am using ipyrad 0.7.30 and the output of step5 (s5.consens.txt) does not have a column named f1loci
nor f2l…
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I am trying to run `Get_loci_annotation` as follows:
```
Get_loci_annotation -out . -gtf home/user/Documents/gtf/hg38/Homo_sapiens.GRCh38.106.chr_patch_hapl_scaff.gtf
```
But I get the following e…
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**Proposed change**
Integrate custom LOCI based ironic image to baremetal operator. This is a follow-up for story https://github.com/airshipit/images/issues/2.