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Dear Prof.Chen,
Thanks for your excellent work! I am a graduate student majoring in metabolomics. According to your User_guide, I have installed R, Rstudio, Rtools40, CPLEX and Git. And my question…
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We've implemented some functionality that allows to group LC-MS *features* (i.e. defined by their m/z and retention time range) into *feature group* where ideally each feature group collects all featu…
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Hi there!
Thanks for your hard work on this package!
I'm trying it out on my metabolomics data currently with a high amount of missing values.
I was wondering if there was a way to make an equi…
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**Metabolomics**: Metabolomics (IF: 3.167); Metabolites (IF: 4.097).
**Biomedical Informatics**: Journal of Biomedical Informatics (IF: 2.950); International Journal of Medical Informatics (IF: 2.731…
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Darren Creek and his lab have carried out metabolomics work on several OSM compounds (see #469 for background). Darren constructed a powerpoint of the results (below) and provided the following commen…
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On studies.nmcdsp.org, visualization of metabolomics data only gives the 'table' option, for example for the TIFN study. I'm not sure if this problems resides in GSCF or in the metabolomics module, or…
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LC-MS metabolomics WDL development
- [ ] Based on the CLI command for LC-MS data dependent data process, create a WDL workflow declaration and configuration json input file.
The workflow should…
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Hi! Is it possible to use Human-GEM as the input model? The optimization steps are taking longer than the default time limit of 3000 seconds, but I am not sure what is a reasonable time to expect, or …
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Hi,
in addition to the name and eMail, the MTD section should support the ORCID as an optional persistent identifier for people
somewhere near:
https://github.com/HUPO-PSI/mzTab/blob/master/speci…
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Hi Daneil,
For Hetionet, I have two brief questions and would like to hear about your insights:
1. on metabolomics side, why didn't you use the [HMDB database](http://www.hmdb.ca/) for linkin…