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Hi there!
Thanks for your hard work on this package!
I'm trying it out on my metabolomics data currently with a high amount of missing values.
I was wondering if there was a way to make an equi…
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There seems some path changes before it can work. Related material https://github.com/artedison/Edison_lab_UGA/wiki/PLS-toolbox-small-check-list
I will create a wiki for this. Anyone has other work…
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Can this tool be moved to the main W4M repo? Then we get containers for the tools.
Xref https://github.com/galaxyproject/planemo-monitor/pull/53#pullrequestreview-2326236381
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In GitLab by @kelsey.chetnik on Jun 15, 2020, 13:12
Commonly used method in transcriptomics... usefulness for metabolomics unclear. Maybe check literature who has used limma in metabolomics.
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We know we are moving forward with RNA-seq, and I think it would be beneficial to rank priorities on other analyses:
Here is a non exhaustive ranked list to start with but would like to get more op…
sr320 updated
3 months ago
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This cannot be finished until CoreMS 3.0 is released
Drafting subtasks
- [ ] Write metaMS.lcmsLipidomicsWorkflow module
- [x] Update metaMS.cli module to source metaMS.lcmsLipidomicsWorkflow mo…
kheal updated
1 month ago
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Hi,
mzMine3 does support mzTab-M export since the GSOC 2020.
Please provide one or more representative mzTab-M files (or links if such files are published in e.g. MetaboLights).
Bonus points if pr…
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**Metabolomics**: Metabolomics (IF: 3.167); Metabolites (IF: 4.097).
**Biomedical Informatics**: Journal of Biomedical Informatics (IF: 2.950); International Journal of Medical Informatics (IF: 2.731…
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On studies.nmcdsp.org, visualization of metabolomics data only gives the 'table' option, for example for the TIFN study. I'm not sure if this problems resides in GSCF or in the metabolomics module, or…