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**Project description**
The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
**Metadata**
* homepage URL: https://trace…
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https://mp.weixin.qq.com/s/cPsR1i49__zQZmTcLDmg0g
ixxmu updated
3 months ago
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Hi,
I am testing the ITS sequencing data which are publicly available in NCBI Sequence Read Archive (SRA) under the BioProject ID PRJNA610042. Follow DADA2 ITS Pipeline Workflow (1.8).
The Primer …
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I got this error like this. Does anyone can help to fix??
I run command on HPC:
snippy --R1 $p_trim/VN0467_1_paired.fastq.gz --R2 $p_trim/VN0467_2_paired.fastq.gz --outdir /lustre7/home/buihoangphu…
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**Project label**
scAgingHumanMaleSkin
**Primary Wrangler:**
Marion & Ami
**Secondary Wrangler:**
Ray
**Associated files:**
Google Drive:
https://docs.google.com/spreadsheets/d/1qhGETqKS5PPg-AVlu…
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Hi I am trying to predict gene structure using Finder.
And it seems this tool is better than PASA, MAKER,,,
So I am planning to get used to this tool.
However, the example data you shared, I coul…
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Hello, is it possible to use fasterq-dump to download original format fastq files?
prefetch and fastq-dump are too slow.
I tried to prefetch SRR21834810 but it did not work at all. I wanted t…
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We are close to releasing our new pipeline schema which describe input parameters. Through chatting to people at BOSC 🍐 I've become aware of a project called [Bioschemas](https://bioschemas.org) which…
ewels updated
3 years ago
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Hello,
Thank you for all the great tools coming from this team.
I gave Braker3 a shot, but am running into an error at the moment. I will report below how I installed Braker3, and how I used it…
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Hello
I was just wondering if there was a detailed description of an *.sra file layout?
I am interested in experimenting with building a tool to extract sequencing records from these files but …