-
The following SED-ML generates the following error:
```
as
```
```
```
```
Traceback (most recent call last):
File "/usr/loc…
-
### Simulation tool
---
id: vcell
version: 7.7.0.9
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.7.0.9/biosimulators.json
specificationsPatch:
version: 7.7.0.9
…
-
Including this additional SED-ML in the [attached example](https://github.com/sys-bio/tellurium/files/4497617/examples.zip)
```
Mcmin
```…
-
-
Currently these concepts are not well documented/linked on the homepage.
* Ontologies Used Kinetic Simulation Algorithm Ontology (https://bioportal.bioontology.org/ontologies/KISAO)
* https://…
-
MetadataManager is only aware of the name and type of an artefact. Therefore, it is not possible to mark a file as the "master" entry in an archive, to get the master artifact (if it exists), or to qu…
-
- Copasi should have been updated now and should show up as a `pass` when running valid omex files created using SBML and SED-ML files. Check whether this is the case.
- double check Brian2 compatibl…
-
---
id: vcell
version: 7.7.0.7
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.7.0.7/biosimulators.json
specificationsPatch:
version: 7.7.0.7
image:
url: ghc…
-
- Split SBMLShowcase/.github/workflows/non-omv.yml in two to separate docker / biosimulators related workflows (see below) to differentiate between biosimulators issues and issues with our code.
``…
-
And coordinate with PMR so that the format is similar?