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Consider implementing support for pairix indexed bgzip files:
https://github.com/4dn-dcic/pairix#pairix
This essentially allows bedpe files to be 2D indexed.
This is likely a solution to any …
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Hi there. I'm attempting to run the selection analyses function with the command:
selectionanalyses(do_meta=FALSE,do_pairwise=TRUE,export='pdf', do_fsthet=FALSE, do_pcadapt=FALSE, do_outflank=FALSE…
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Hi, I was just wondering what part of the code calculates distances for vanilla HDBSCAN and if this could be easily replaced by a custom metric?
My use-case is that I have around 77 million data po…
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For example,
``` r
dat [1] "Using 19 cores for parallelization."
#> [1] "Finished EFAs. Starting CFAs"
lavaan::lavInspect(x$cfas[[1]][[1]], "options")$missing
#> [1] "listwise"
```
Created…
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https://stackoverflow.com/questions/59566824/one-sided-proportion-test-for-significantly-high-values
Suppose we have k-sample binomial proportions, i.e. 2 x k contingency table with independent…
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Hi Izear
Thanks for your great work here. We are using your repo in our app Forby.io and we would like to add 2 algorithms based on some research we came across:
Minimax-TD
https://drive.google…
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Hi, I have multiple sets of gene lists and am running pairwise enrichment using the following function on them:
```
# function runs enrichment and saves to file for p and padj
# takes two set lists…
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Here is a screenshot of an example workflow.
After you have responses from different systems/models you can open a Pairwise Comparison Node that will run an evaluation LLM on all possible pairs (forw…
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Made a new folder/package for doing the same process in AA. The biggest change will be using subtracted clusters instead of RawClusters. Eventually I will want to combine the packages and use a toggle…
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I'm encountering an error while following http://lemieuxl.github.io/pyGenClean/install_linux.html#testing-the-installation
I installed pyGenClean using virtualenv as directed.
Command:
`run_pyG…