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https://mp.weixin.qq.com/s/KnEtsdpoaD5yBaVPX9A_JQ
ixxmu updated
2 years ago
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Need to add `elif VARdiff == 'none'` to:
https://github.com/Pathogen-Genomics-Cymru/covate/blob/0a7dc5962fbe39df1c1e5c94d659dc65faff7d35/covate/build_model.py#L406-L417
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https://github.com/Pathogen-Genomics-Cymru/covate/blob/e483686cbe6119a099db9f1d734e7df952cb7cb2/covate/build_model.py#L203
throws error for UK1458
```
IndexError: index 1 is out of bounds for axi…
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https://github.com/Pathogen-Genomics-Cymru/covate/blob/e483686cbe6119a099db9f1d734e7df952cb7cb2/covate/build_model.py#L123
throws error for UK3413
```
scipy/linalg/decomp_cholesky.py", line 38, i…
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https://mp.weixin.qq.com/s/3b1_kGNTNBlHwPg9Y7py1g
ixxmu updated
2 years ago
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[Viral_Analysis](https://github.com/bioinformatics-hub-ke/BOSS-miniprojects/tree/main/Viral_Analysis)
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https://mp.weixin.qq.com/s/F6be3WHpJROToPV-SDpGQg
ixxmu updated
2 years ago
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#### Summary:
New thing I just saw here: https://twitter.com/natfriedman/status/1420122675813441540.
Have not looked into the details yet.
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FutureWarning: Value based partial slicing on non-monotonic DatetimeIndexes with non-existing keys is deprecated and will raise a KeyError in a future Version.
https://github.com/Pathogen-Genomics-…
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Following terms are not used in genomics, clinEpi and microbiomeDB datasets. Some of them may be used as controlled vocabulary of values of the variables or VectorBase datasets. Some terms may conside…