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Allow txPathways to build treatment history using different algorithms:
- original pathways code
- adapted pathways code
- treatmentPatterns algorithm
End point is same th table structure to …
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This is a meta-issue to research other install/distribution channels we might want to add to make Lando as widely available as possible. Here are some idea off the top of my head:
* Homebrew, alrea…
pirog updated
2 months ago
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Hello,
I am running fgsea on my custom_pathways. I have 445 pathways with rather large gene-sets (see the histogram plot).
![custom_pathways_distribution](https://github.com/ctlab/fgsea/assets/67…
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**Submitting author:** @romainsacchi (Romain Sacchi)
**Repository:** https://github.com/polca/pathways
**Branch with paper.md** (empty if default branch):
**Version:** 0.0.1
**Editor:** Pending
**Rev…
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## Background
ScholarSphere is a general purpose repository that allows users to deposit all types of research materials -- data, instructional materials, articles, etc. This flexibility has been i…
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- [x] Add column to comparison table for number of libraries
- [x] Add DAVID to list (moved MSigDB to "database-specific" bullet point since we describe it in terms of a data source more than the act…
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hi,
thanks for your tool ! I'm new to the pathway analysis and have quite a basic question: I imagine that pathway reported by MinPath are not all complete. I guess that's what is actually reported…
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Correlate metabolites to pathways. We have to look for a database and enrichment method and then maybe just start with basic correlation values.
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Regarding the KEGG annotation usage error, I have already followed up with #572
Seems like the error comes from not updating R or BiocManager or clusterprofiler..
I am currently using R 4.4, Bioc…
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I updated map on Google maps for this shop. Can you please update the path to go to this shop follow the same as Google maps?
The current maps on the openmaptiles to the Wayson Auto Sdn Bhd is not …