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GO:0000120 RNA polymerase I transcription factor complex
A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I.
I have
+ RNA polymerase I …
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Hello, glad to see your excellent work!
I encountered a TypeError: string indices must be integers when I tried to reproduce the result of protein-ligand binding affinity prediction using command `py…
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Hi @SumeraMalik123,
I am @mattodd 's PhD student working on nsp13 FBDD. We are planning to set up and replicate your SPR assay with David Selwood's group here at UCL in the next few weeks. I am n…
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We are trying to run YANK on a protein-ligand complex (hsp90/hsp90_100). In the protein crystal structure 3owd_apo_wts.pdb, we kept two interstitial water molecules in the binding site. We ran YANK ca…
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The first process of train VAE was successful.
But an error occurred when train_ligand_binging_model.
polygon train_ligand_binding_model --uniprot_id Q9Y572O --binding_db_path /home/yanbosmu/Bioin…
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During the most recent `snpashot` run, we failed on an SGD sanity check.
Essentially, the SGD source file had 152076 annotations and the final file had 65609--a reduction of about 100k. This large …
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Hi, I was running several of my VCF files generated by GATK haplotypeCaller from multiple samples. However, only on VCF file occurred following errors. Could you please tell me what's wrong with this …
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Hi,
I will be working on signalling pathways quite a bit this year and will be needing GTP and GDP bound forms of the characterised signalling GTPases.
Systematic ID Gene name Product descriptio…
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I just wanted to repost the notes on what goes into a "typical protein:ligand setup pipeline" from our meeting at MolSSI on 8 Oct 2016.
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# Contributors
* John Chodera
* Julien Michel
* Peter…